| '$' Method to extract ATO slots directly | $,ATO-method |
| S4 class: ATO_ani | .ATO_ani ATO_ani |
| Helper function to turn debug mode on or off | ato_debug |
| Helper function send a message at the start of each function | ato_debug_header |
| S4 class: ATO_dep | .ATO_dep ATO_dep |
| S4 class: ATO_det | .ATO_det ATO_det |
| S4 class: ATO_log | .ATO_log ATO_log |
| Helper function to turn automatic matching on or off | ato_match_immediate |
| S4 class: ATO_obs | .ATO_obs ATO_obs |
| Helper function to set the global type of ATO tables | ato_table_type_global |
| S4 class: ATO_tag | .ATO_tag ATO_tag |
| S4 class: ATO | ATO-class |
| Generic to extract the ani slot as a table | ani ani,ATO-method get_ani get_ani,ATO-method |
| Generic to extract the dep slot as a table | dep dep,ATO-method det,ATO-method get_dep get_dep,ATO-method |
| Generic to extract detections as a table | det get_det get_det,ATO-method |
| A wrapper of 'get_det' to extract detections for transmitters listed in the dep slot | get_det_dep get_det_dep,ATO-method |
| A wrapper of 'get_det' to extract detections for transmitters listed in the tag slot | get_det_tag get_det_tag,ATO-method |
| Generic to extract the log slot as a table | get_log get_log,ATO-method |
| Generic to extract the obs slot as a table | get_obs get_obs,ATO-method obs obs,ATO-method |
| Generic to extract the tag slot as a table | get_tag get_tag,ATO-method tag tag,ATO-method |
| Generic to check if an ATO has data in a given slot | has has,ATO-method |
| Initiate an 'ATO' | init_ato |
| Wrapper for is(x, "ATO") | is_ato |
| Log a new comment | log_comment |
| Log a new event | log_event |
| Make an ATO animals object | make_ani |
| Make an ATO deployments object | make_dep |
| Make an ATO detections object | make_det |
| Make an ATO observations object | make_obs |
| Make an ATO tags object | make_tag |
| Match the various slots of the ATO object | match_update |
| Method to show an 'ATO' | show,ATO-method |
| Summary method for an ATO_ani slot object | summary,ATO_ani-method |
| Summary method for an ATO_dep object | summary,ATO_dep-method |
| Summary method for an ATO_det slot object | summary,ATO_det-method |
| Summary method for an ATO_log slot object | summary,ATO_log-method |
| Summary method for an ATO_obs slot object | summary,ATO_obs-method |
| Summary method for an ATO_tag slot object | summary,ATO_tag-method |
| Table type of ATO data | table_type table_type,ATO-method table_type,ATO_ani-method table_type,ATO_dep-method table_type,ATO_det-method table_type,ATO_obs-method table_type,ATO_tag-method |
| Assign a new table type to an ATO or an ATO slot. | table_type<- table_type<-,ATO-method table_type<-,ATO_ani-method table_type<-,ATO_dep-method table_type<-,ATO_det-method table_type<-,ATO_obs-method table_type<-,ATO_tag-method |
| What is the timezone of this ATO object? | tzone tzone,ATO-method tzone,ATO_ani-method tzone,ATO_dep-method tzone,ATO_det-method tzone,ATO_obs-method tzone,ATO_tag-method |
| Modify the time zone of an ATO object | tzone<- tzone<-,ATO-method tzone<-,ATO_ani-method tzone<-,ATO_dep-method tzone<-,ATO_det-method tzone<-,ATO_obs-method tzone<-,ATO_tag-method |
